Protein Details: Gamma-aminobutyric acid receptor subunit alpha-5

Protein ID

ICDB_Pro_0788

Protein Name

Gamma-aminobutyric acid receptor subunit alpha-5

Gene Name

GABRA5

Organism

Bos taurus (Bovine)

Length

462 amino acids

AlphaFoldDB

AF-Q08E50-F1-model_v4.pdb

Function

Alpha subunit of the heteropentameric ligand-gated chloride channel gated by gamma-aminobutyric acid (GABA); a major inhibitory neurotransmitter in the brain. GABA-gated chloride channels; also named GABA(A) receptors (GABAAR); consist of five subunits arranged around a central pore and contain GABA active binding site(s) located at the alpha and beta subunit interface(s). When activated by GABA; GABAARs selectively allow the flow of chloride anions across the cell membrane down their electrochemical gradient (By similarity). GABAARs containing alpha-5/GABRA5 subunits are mainly extrasynaptic and contribute to the tonic GABAergic inhibition in the hippocampus (By similarity). Extrasynaptic alpha-5-containing GABAARs in CA1 pyramidal neurons play a role in learning and memory processes (By similarity).

Sequence

MDNGMFSSFIMIKNLLLFCISMNLASHFGFSQMPTSSVKAETDDNITIFTRILDGLLDGYDNRLRPGLGERITQVRTDIYVTSFGPVSDTEMEYTIDVFFRQSWKDERLRFKGPMQRLPLNNLLASKIWTPDTFFHNGKKSIAHNMTTPNKLLRLEDDGTLLYTMRLTISAECPMQLEDFPMDAHACPLKFGSYAYPNSEVIYVWTNGTAKSVVVAEDGSRLNQYHLMGQTVGTENISTSTGEYTIMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGKKALEAAKIKKKERELTINKSTNAYTTGKMTHPPNIPKEQTPAGTTNASSASVKPEDKASENKKTYNSISKIDKMSRIIFPLLFGTFNLVYWATYLNREPVIKGATSPK

PDB Structures

Ligand Binding

1. DICL_CP

2. DICL_Pep

Binding Site

BINDING 101; /ligand="4-aminobutanoate": "ligand shared with the neighboring beta subunit GABRB3"; BINDING 164; /ligand="4-aminobutanoate": "ligand shared with the neighboring beta subunit GABRB3"

Disease

Location

DOI ID

RefSeq

NP_001069312.1; XP_005221788.1; XP_005221790.1; XP_005221791.1

Feature